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Please allow hisatgenotype to run with absolute paths #72

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bozbezbozzel opened this issue Nov 10, 2022 · 0 comments
Open

Please allow hisatgenotype to run with absolute paths #72

bozbezbozzel opened this issue Nov 10, 2022 · 0 comments

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@bozbezbozzel
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I'm aware of the --in-dir option, but not allowing absolute paths for input fastq's is making it way more difficult than it should be for me to incorporate hisatgenotype into my Snakemake workflow.
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@bozbezbozzel