[BUG-REPORT] Can't install vaex in Google Colab - Failed building wheel for vaex-core

[lioryasur]

Description
Using "pip install vaex" or "!pip install vaex" fails recently in Google Colab:

Additional information
Full output:
Collecting vaex
Downloading vaex-4.17.0-py3-none-any.whl.metadata (6.0 kB)
Collecting vaex-core~=4.17.1 (from vaex)
Downloading vaex-core-4.17.1.tar.gz (2.5 MB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 2.5/2.5 MB 17.2 MB/s eta 0:00:00
Installing build dependencies ... done
Getting requirements to build wheel ... done
Preparing metadata (pyproject.toml) ... done
Collecting vaex-astro<0.10,>=0.9.3 (from vaex)
Downloading vaex_astro-0.9.3-py3-none-any.whl.metadata (345 bytes)
Collecting vaex-hdf5<0.15,>=0.13.0 (from vaex)
Downloading vaex_hdf5-0.14.1-py3-none-any.whl.metadata (321 bytes)
Collecting vaex-viz<0.6,>=0.5.4 (from vaex)
Downloading vaex_viz-0.5.4-py3-none-any.whl.metadata (345 bytes)
Collecting vaex-server~=0.9.0 (from vaex)
Downloading vaex_server-0.9.0-py3-none-any.whl.metadata (430 bytes)
Collecting vaex-jupyter<0.9,>=0.8.2 (from vaex)
Downloading vaex_jupyter-0.8.2-py3-none-any.whl.metadata (517 bytes)
Collecting vaex-ml<0.19,>=0.18.3 (from vaex)
Downloading vaex_ml-0.18.3-py3-none-any.whl.metadata (485 bytes)
Requirement already satisfied: astropy in /usr/local/lib/python3.11/dist-packages (from vaex-astro<0.10,>=0.9.3->vaex) (6.1.7)
Requirement already satisfied: numpy>=1.16 in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (1.26.4)
Collecting aplus (from vaex-core~=4.17.1->vaex)
Downloading aplus-0.11.0.tar.gz (3.7 kB)
Preparing metadata (setup.py) ... done
Requirement already satisfied: tabulate>=0.8.3 in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (0.9.0)
Requirement already satisfied: future>=0.15.2 in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (1.0.0)
Requirement already satisfied: pyyaml in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (6.0.2)
Requirement already satisfied: progressbar2 in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (4.5.0)
Requirement already satisfied: requests in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (2.32.3)
Requirement already satisfied: six in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (1.17.0)
Requirement already satisfied: cloudpickle in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (3.1.0)
Requirement already satisfied: pandas in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (2.2.2)
Requirement already satisfied: dask!=2022.4.0 in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (2024.10.0)
Requirement already satisfied: nest-asyncio>=1.3.3 in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (1.6.0)
Requirement already satisfied: pyarrow>=5.0.0 in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (17.0.0)
Requirement already satisfied: frozendict!=2.2.0 in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (2.4.6)
Collecting blake3 (from vaex-core~=4.17.1->vaex)
Downloading blake3-1.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (4.2 kB)
Requirement already satisfied: filelock in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (3.16.1)
Requirement already satisfied: pydantic>=1.8.0 in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (2.10.5)
Requirement already satisfied: rich in /usr/local/lib/python3.11/dist-packages (from vaex-core~=4.17.1->vaex) (13.9.4)
Requirement already satisfied: h5py>=2.9 in /usr/local/lib/python3.11/dist-packages (from vaex-hdf5<0.15,>=0.13.0->vaex) (3.12.1)
Requirement already satisfied: bqplot>=0.10.1 in /usr/local/lib/python3.11/dist-packages (from vaex-jupyter<0.9,>=0.8.2->vaex) (0.12.44)
Collecting ipyvolume>=0.4 (from vaex-jupyter<0.9,>=0.8.2->vaex)
Downloading ipyvolume-0.6.3-py3-none-any.whl.metadata (2.3 kB)
Requirement already satisfied: ipyleaflet in /usr/local/lib/python3.11/dist-packages (from vaex-jupyter<0.9,>=0.8.2->vaex) (0.19.2)
Collecting ipympl (from vaex-jupyter<0.9,>=0.8.2->vaex)
Downloading ipympl-0.9.6-py3-none-any.whl.metadata (8.7 kB)
Collecting ipyvuetify<2,>=1.2.2 (from vaex-jupyter<0.9,>=0.8.2->vaex)
Downloading ipyvuetify-1.10.0-py2.py3-none-any.whl.metadata (7.5 kB)
Requirement already satisfied: xarray in /usr/local/lib/python3.11/dist-packages (from vaex-jupyter<0.9,>=0.8.2->vaex) (2025.1.1)
Requirement already satisfied: numba in /usr/local/lib/python3.11/dist-packages (from vaex-ml<0.19,>=0.18.3->vaex) (0.60.0)
Requirement already satisfied: traitlets in /usr/local/lib/python3.11/dist-packages (from vaex-ml<0.19,>=0.18.3->vaex) (5.7.1)
Requirement already satisfied: jinja2 in /usr/local/lib/python3.11/dist-packages (from vaex-ml<0.19,>=0.18.3->vaex) (3.1.5)
Requirement already satisfied: tornado>4.1 in /usr/local/lib/python3.11/dist-packages (from vaex-server~=0.9.0->vaex) (6.3.3)
Requirement already satisfied: cachetools in /usr/local/lib/python3.11/dist-packages (from vaex-server~=0.9.0->vaex) (5.5.0)
Collecting fastapi (from vaex-server~=0.9.0->vaex)
Downloading fastapi-0.115.6-py3-none-any.whl.metadata (27 kB)
Collecting uvicorn[standard] (from vaex-server~=0.9.0->vaex)
Downloading uvicorn-0.34.0-py3-none-any.whl.metadata (6.5 kB)
Requirement already satisfied: matplotlib>=1.3.1 in /usr/local/lib/python3.11/dist-packages (from vaex-viz<0.6,>=0.5.4->vaex) (3.10.0)
Requirement already satisfied: pillow in /usr/local/lib/python3.11/dist-packages (from vaex-viz<0.6,>=0.5.4->vaex) (11.1.0)
Requirement already satisfied: ipywidgets<9,>=7.5.0 in /usr/local/lib/python3.11/dist-packages (from bqplot>=0.10.1->vaex-jupyter<0.9,>=0.8.2->vaex) (7.7.1)
Requirement already satisfied: traittypes>=0.0.6 in /usr/local/lib/python3.11/dist-packages (from bqplot>=0.10.1->vaex-jupyter<0.9,>=0.8.2->vaex) (0.2.1)
Requirement already satisfied: click>=8.1 in /usr/local/lib/python3.11/dist-packages (from dask!=2022.4.0->vaex-core~=4.17.1->vaex) (8.1.8)
Requirement already satisfied: fsspec>=2021.09.0 in /usr/local/lib/python3.11/dist-packages (from dask!=2022.4.0->vaex-core~=4.17.1->vaex) (2024.10.0)
Requirement already satisfied: packaging>=20.0 in /usr/local/lib/python3.11/dist-packages (from dask!=2022.4.0->vaex-core~=4.17.1->vaex) (24.2)
Requirement already satisfied: partd>=1.4.0 in /usr/local/lib/python3.11/dist-packages (from dask!=2022.4.0->vaex-core~=4.17.1->vaex) (1.4.2)
Requirement already satisfied: toolz>=0.10.0 in /usr/local/lib/python3.11/dist-packages (from dask!=2022.4.0->vaex-core~=4.17.1->vaex) (0.12.1)
Requirement already satisfied: importlib-metadata>=4.13.0 in /usr/local/lib/python3.11/dist-packages (from dask!=2022.4.0->vaex-core~=4.17.1->vaex) (8.5.0)
Collecting ipywebrtc (from ipyvolume>=0.4->vaex-jupyter<0.9,>=0.8.2->vaex)
Downloading ipywebrtc-0.6.0-py2.py3-none-any.whl.metadata (825 bytes)
Collecting ipyvue>=1.7.0 (from ipyvolume>=0.4->vaex-jupyter<0.9,>=0.8.2->vaex)
Downloading ipyvue-1.11.2-py2.py3-none-any.whl.metadata (1.1 kB)
Collecting pythreejs>=2.4.0 (from ipyvolume>=0.4->vaex-jupyter<0.9,>=0.8.2->vaex)
Downloading pythreejs-2.4.2-py3-none-any.whl.metadata (5.4 kB)
Requirement already satisfied: contourpy>=1.0.1 in /usr/local/lib/python3.11/dist-packages (from matplotlib>=1.3.1->vaex-viz<0.6,>=0.5.4->vaex) (1.3.1)
Requirement already satisfied: cycler>=0.10 in /usr/local/lib/python3.11/dist-packages (from matplotlib>=1.3.1->vaex-viz<0.6,>=0.5.4->vaex) (0.12.1)
Requirement already satisfied: fonttools>=4.22.0 in /usr/local/lib/python3.11/dist-packages (from matplotlib>=1.3.1->vaex-viz<0.6,>=0.5.4->vaex) (4.55.3)
Requirement already satisfied: kiwisolver>=1.3.1 in /usr/local/lib/python3.11/dist-packages (from matplotlib>=1.3.1->vaex-viz<0.6,>=0.5.4->vaex) (1.4.8)
Requirement already satisfied: pyparsing>=2.3.1 in /usr/local/lib/python3.11/dist-packages (from matplotlib>=1.3.1->vaex-viz<0.6,>=0.5.4->vaex) (3.2.1)
Requirement already satisfied: python-dateutil>=2.7 in /usr/local/lib/python3.11/dist-packages (from matplotlib>=1.3.1->vaex-viz<0.6,>=0.5.4->vaex) (2.8.2)
Requirement already satisfied: pytz>=2020.1 in /usr/local/lib/python3.11/dist-packages (from pandas->vaex-core~=4.17.1->vaex) (2024.2)
Requirement already satisfied: tzdata>=2022.7 in /usr/local/lib/python3.11/dist-packages (from pandas->vaex-core~=4.17.1->vaex) (2024.2)
Requirement already satisfied: annotated-types>=0.6.0 in /usr/local/lib/python3.11/dist-packages (from pydantic>=1.8.0->vaex-core~=4.17.1->vaex) (0.7.0)
Requirement already satisfied: pydantic-core==2.27.2 in /usr/local/lib/python3.11/dist-packages (from pydantic>=1.8.0->vaex-core~=4.17.1->vaex) (2.27.2)
Requirement already satisfied: typing-extensions>=4.12.2 in /usr/local/lib/python3.11/dist-packages (from pydantic>=1.8.0->vaex-core~=4.17.1->vaex) (4.12.2)
Requirement already satisfied: pyerfa>=2.0.1.1 in /usr/local/lib/python3.11/dist-packages (from astropy->vaex-astro<0.10,>=0.9.3->vaex) (2.0.1.5)
Requirement already satisfied: astropy-iers-data>=0.2024.10.28.0.34.7 in /usr/local/lib/python3.11/dist-packages (from astropy->vaex-astro<0.10,>=0.9.3->vaex) (0.2025.1.6.0.33.42)
Collecting starlette<0.42.0,>=0.40.0 (from fastapi->vaex-server~=0.9.0->vaex)
Downloading starlette-0.41.3-py3-none-any.whl.metadata (6.0 kB)
Requirement already satisfied: branca>=0.5.0 in /usr/local/lib/python3.11/dist-packages (from ipyleaflet->vaex-jupyter<0.9,>=0.8.2->vaex) (0.8.1)
Requirement already satisfied: jupyter-leaflet<0.20,>=0.19 in /usr/local/lib/python3.11/dist-packages (from ipyleaflet->vaex-jupyter<0.9,>=0.8.2->vaex) (0.19.2)
Requirement already satisfied: xyzservices>=2021.8.1 in /usr/local/lib/python3.11/dist-packages (from ipyleaflet->vaex-jupyter<0.9,>=0.8.2->vaex) (2024.9.0)
Requirement already satisfied: ipython<9 in /usr/local/lib/python3.11/dist-packages (from ipympl->vaex-jupyter<0.9,>=0.8.2->vaex) (7.34.0)
Requirement already satisfied: MarkupSafe>=2.0 in /usr/local/lib/python3.11/dist-packages (from jinja2->vaex-ml<0.19,>=0.18.3->vaex) (3.0.2)
Requirement already satisfied: llvmlite<0.44,>=0.43.0dev0 in /usr/local/lib/python3.11/dist-packages (from numba->vaex-ml<0.19,>=0.18.3->vaex) (0.43.0)
Requirement already satisfied: python-utils>=3.8.1 in /usr/local/lib/python3.11/dist-packages (from progressbar2->vaex-core~=4.17.1->vaex) (3.9.1)
Requirement already satisfied: charset-normalizer<4,>=2 in /usr/local/lib/python3.11/dist-packages (from requests->vaex-core~=4.17.1->vaex) (3.4.1)
Requirement already satisfied: idna<4,>=2.5 in /usr/local/lib/python3.11/dist-packages (from requests->vaex-core~=4.17.1->vaex) (3.10)
Requirement already satisfied: urllib3<3,>=1.21.1 in /usr/local/lib/python3.11/dist-packages (from requests->vaex-core~=4.17.1->vaex) (2.3.0)
Requirement already satisfied: certifi>=2017.4.17 in /usr/local/lib/python3.11/dist-packages (from requests->vaex-core~=4.17.1->vaex) (2024.12.14)
Requirement already satisfied: markdown-it-py>=2.2.0 in /usr/local/lib/python3.11/dist-packages (from rich->vaex-core~=4.17.1->vaex) (3.0.0)
Requirement already satisfied: pygments<3.0.0,>=2.13.0 in /usr/local/lib/python3.11/dist-packages (from rich->vaex-core~=4.17.1->vaex) (2.18.0)
Requirement already satisfied: h11>=0.8 in /usr/local/lib/python3.11/dist-packages (from uvicorn[standard]->vaex-server~=0.9.0->vaex) (0.14.0)
Collecting httptools>=0.6.3 (from uvicorn[standard]->vaex-server~=0.9.0->vaex)
Downloading httptools-0.6.4-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.6 kB)
Collecting python-dotenv>=0.13 (from uvicorn[standard]->vaex-server~=0.9.0->vaex)
Downloading python_dotenv-1.0.1-py3-none-any.whl.metadata (23 kB)
Collecting uvloop!=0.15.0,!=0.15.1,>=0.14.0 (from uvicorn[standard]->vaex-server~=0.9.0->vaex)
Downloading uvloop-0.21.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (4.9 kB)
Collecting watchfiles>=0.13 (from uvicorn[standard]->vaex-server~=0.9.0->vaex)
Downloading watchfiles-1.0.4-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (4.9 kB)
Requirement already satisfied: websockets>=10.4 in /usr/local/lib/python3.11/dist-packages (from uvicorn[standard]->vaex-server~=0.9.0->vaex) (14.1)
Requirement already satisfied: zipp>=3.20 in /usr/local/lib/python3.11/dist-packages (from importlib-metadata>=4.13.0->dask!=2022.4.0->vaex-core~=4.17.1->vaex) (3.21.0)
Requirement already satisfied: setuptools>=18.5 in /usr/local/lib/python3.11/dist-packages (from ipython<9->ipympl->vaex-jupyter<0.9,>=0.8.2->vaex) (75.1.0)
Collecting jedi>=0.16 (from ipython<9->ipympl->vaex-jupyter<0.9,>=0.8.2->vaex)
Downloading jedi-0.19.2-py2.py3-none-any.whl.metadata (22 kB)
Requirement already satisfied: decorator in /usr/local/lib/python3.11/dist-packages (from ipython<9->ipympl->vaex-jupyter<0.9,>=0.8.2->vaex) (4.4.2)
Requirement already satisfied: pickleshare in /usr/local/lib/python3.11/dist-packages (from ipython<9->ipympl->vaex-jupyter<0.9,>=0.8.2->vaex) (0.7.5)
Requirement already satisfied: prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0 in /usr/local/lib/python3.11/dist-packages (from ipython<9->ipympl->vaex-jupyter<0.9,>=0.8.2->vaex) (3.0.48)
Requirement already satisfied: backcall in /usr/local/lib/python3.11/dist-packages (from ipython<9->ipympl->vaex-jupyter<0.9,>=0.8.2->vaex) (0.2.0)
Requirement already satisfied: matplotlib-inline in /usr/local/lib/python3.11/dist-packages (from ipython<9->ipympl->vaex-jupyter<0.9,>=0.8.2->vaex) (0.1.7)
Requirement already satisfied: pexpect>4.3 in /usr/local/lib/python3.11/dist-packages (from ipython<9->ipympl->vaex-jupyter<0.9,>=0.8.2->vaex) (4.9.0)
Requirement already satisfied: ipykernel>=4.5.1 in /usr/local/lib/python3.11/dist-packages (from ipywidgets<9,>=7.5.0->bqplot>=0.10.1->vaex-jupyter<0.9,>=0.8.2->vaex) (5.5.6)
Requirement already satisfied: ipython-genutils~=0.2.0 in /usr/local/lib/python3.11/dist-packages (from ipywidgets<9,>=7.5.0->bqplot>=0.10.1->vaex-jupyter<0.9,>=0.8.2->vaex) (0.2.0)
Requirement already satisfied: widgetsnbextension~=3.6.0 in /usr/local/lib/python3.11/dist-packages (from ipywidgets<9,>=7.5.0->bqplot>=0.10.1->vaex-jupyter<0.9,>=0.8.2->vaex) (3.6.10)
Requirement already satisfied: jupyterlab-widgets>=1.0.0 in /usr/local/lib/python3.11/dist-packages (from ipywidgets<9,>=7.5.0->bqplot>=0.10.1->vaex-jupyter<0.9,>=0.8.2->vaex) (3.0.13)
Requirement already satisfied: mdurl~=0.1 in /usr/local/lib/python3.11/dist-packages (from markdown-it-py>=2.2.0->rich->vaex-core~=4.17.1->vaex) (0.1.2)
Requirement already satisfied: locket in /usr/local/lib/python3.11/dist-packages (from partd>=1.4.0->dask!=2022.4.0->vaex-core~=4.17.1->vaex) (1.0.0)
Collecting ipydatawidgets>=1.1.1 (from pythreejs>=2.4.0->ipyvolume>=0.4->vaex-jupyter<0.9,>=0.8.2->vaex)
Downloading ipydatawidgets-4.3.5-py2.py3-none-any.whl.metadata (1.4 kB)
Requirement already satisfied: anyio<5,>=3.4.0 in /usr/local/lib/python3.11/dist-packages (from starlette<0.42.0,>=0.40.0->fastapi->vaex-server~=0.9.0->vaex) (3.7.1)
Requirement already satisfied: sniffio>=1.1 in /usr/local/lib/python3.11/dist-packages (from anyio<5,>=3.4.0->starlette<0.42.0,>=0.40.0->fastapi->vaex-server~=0.9.0->vaex) (1.3.1)
Requirement already satisfied: jupyter-client in /usr/local/lib/python3.11/dist-packages (from ipykernel>=4.5.1->ipywidgets<9,>=7.5.0->bqplot>=0.10.1->vaex-jupyter<0.9,>=0.8.2->vaex) (6.1.12)
Requirement already satisfied: parso<0.9.0,>=0.8.4 in /usr/local/lib/python3.11/dist-packages (from jedi>=0.16->ipython<9->ipympl->vaex-jupyter<0.9,>=0.8.2->vaex) (0.8.4)
Requirement already satisfied: ptyprocess>=0.5 in /usr/local/lib/python3.11/dist-packages (from pexpect>4.3->ipython<9->ipympl->vaex-jupyter<0.9,>=0.8.2->vaex) (0.7.0)
Requirement already satisfied: wcwidth in /usr/local/lib/python3.11/dist-packages (from prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0->ipython<9->ipympl->vaex-jupyter<0.9,>=0.8.2->vaex) (0.2.13)
Requirement already satisfied: notebook>=4.4.1 in /usr/local/lib/python3.11/dist-packages (from widgetsnbextension~=3.6.0->ipywidgets<9,>=7.5.0->bqplot>=0.10.1->vaex-jupyter<0.9,>=0.8.2->vaex) (6.5.5)
Requirement already satisfied: pyzmq<25,>=17 in /usr/local/lib/python3.11/dist-packages (from notebook>=4.4.1->widgetsnbextension~=3.6.0->ipywidgets<9,>=7.5.0->bqplot>=0.10.1->vaex-jupyter<0.9,>=0.8.2->vaex) (24.0.1)
Requirement already satisfied: argon2-cffi in /usr/local/lib/python3.11/dist-packages (from notebook>=4.4.1->widgetsnbextension~=3.6.0->ipywidgets<9,>=7.5.0->bqplot>=0.10.1->vaex-jupyter<0.9,>=0.8.2->vaex) (23.1.0)
Requirement already satisfied: jupyter-core>=4.6.1 in /usr/local/lib/python3.11/dist-packages (from notebook>=4.4.1->widgetsnbextension~=3.6.0->ipywidgets<9,>=7.5.0->bqplot>=0.10.1->vaex-jupyter<0.9,>=0.8.2->vaex) (5.7.2)
Requirement already satisfied: nbformat in /usr/local/lib/python3.11/dist-packages (from notebook>=4.4.1->widgetsnbextension~=3.6.0->ipywidgets<9,>=7.5.0->bqplot>=0.10.1->vaex-jupyter<0.9,>=0.8.2->vaex) (5.10.4)
Requirement already satisfied: nbconvert>=5 in /usr/local/lib/python3.11/dist-packages (from notebook>=4.4.1->widgetsnbextension~=3.6.0->ipywidgets<9,>=7.5.0->bqplot>=0.10.1->vaex-jupyter<0.9,>=0.8.2->vaex) (7.16.5)
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Building wheels for collected packages: vaex-core, aplus
error: subprocess-exited-with-error

× Building wheel for vaex-core (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> See above for output.

note: This error originates from a subprocess, and is likely not a problem with pip.
Building wheel for vaex-core (pyproject.toml) ... error
ERROR: Failed building wheel for vaex-core
Building wheel for aplus (setup.py) ... done
Created wheel for aplus: filename=aplus-0.11.0-py3-none-any.whl size=4366 sha256=08af119de39f836c0f36cb23c151fa8c3b4616076ee57a6b29412253757ee9ac
Stored in directory: /root/.cache/pip/wheels/74/1c/74/052c2629ccf684eaf53e267e24052316d65242c3e02fb79a68
Successfully built aplus
Failed to build vaex-core
ERROR: ERROR: Failed to build installable wheels for some pyproject.toml based projects (vaex-core)

[ddelange]

support for 3.11 was added (and vaex-core released to PyPI), but not finalized: vaex, vaex-ml, etc still need corresponding releases cc @maartenbreddels

ref #2331 (comment)