Bump python version to 3.13 #138
gh-ci.yaml
on: pull_request
pylint_check
20s
pypi_check
15s
Matrix: main-tests
Annotations
3 errors and 80 warnings
main-tests (ubuntu-latest, 3.13, develop)
The process '/usr/share/miniconda3/condabin/mamba' failed with exit code 1
|
main-tests (windows-latest, 3.13, develop)
The process 'C:\Miniconda3\condabin\mamba.bat' failed with exit code 1
|
main-tests (macOS-latest, 3.13, develop)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
|
main-tests (ubuntu-latest, 3.13, develop)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (ubuntu-latest, 3.13, develop)
/usr/share/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (ubuntu-latest, 3.13, develop)
LibMambaUnsatisfiableError: Encountered problems while solving:
- nothing provides mdanalysis 0.15.0 needed by mdanalysistests-0.15.0-py27_0
Could not solve for environment specs
The following packages are incompatible
├─ mdanalysistests is installable with the potential options
│ ├─ mdanalysistests 0.15.0 would require
│ │ └─ mdanalysis 0.15.0 , which does not exist (perhaps a missing channel);
│ ├─ mdanalysistests 0.16.0 would require
│ │ └─ mdanalysis 0.16.0 , which does not exist (perhaps a missing channel);
│ ├─ mdanalysistests 0.16.1 would require
│ │ └─ mdanalysis 0.16.1 , which does not exist (perhaps a missing channel);
│ ├─ mdanalysistests [0.16.2|0.17.0|...|0.20.1] would require
│ │ └─ python [2.7* |>=2.7,<2.8.0a0 ], which can be installed;
│ ├─ mdanalysistests [0.17.0|0.18.0] would require
│ │ └─ python [3.5* |>=3.5,<3.6.0a0 ], which can be installed;
│ ├─ mdanalysistests 0.17.0 would require
│ │ └─ python 3.6* , which can be installed;
│ ├─ mdanalysistests [0.18.0|0.19.0|...|2.0.0] would require
│ │ └─ python >=3.6,<3.7.0a0 , which can be installed;
│ ├─ mdanalysistests [0.19.2|0.20.1|...|2.1.0] would require
│ │ └─ python >=3.7,<3.8.0a0 , which can be installed;
│ ├─ mdanalysistests [0.20.1|1.0.0|...|2.2.0] would require
│ │ └─ python >=3.8,<3.9.0a0 , which can be installed;
│ ├─ mdanalysistests [2.0.0|2.1.0|2.2.0] would require
│ │ └─ python >=3.9,<3.10.0a0 , which can be installed;
│ ├─ mdanalysistests [2.1.0|2.2.0] would require
│ │ └─ python >=3.10,<3.11.0a0 , which can be installed;
│ ├─ mdanalysistests [2.2.0|2.3.0] would require
│ │ └─ python >=3.8,<=3.10 , which can be installed;
│ ├─ mdanalysistests [2.4.1|2.4.2|2.4.3] would require
│ │ └─ python >=3.8,<=3.11 , which can be installed;
│ ├─ mdanalysistests [2.5.0|2.6.1] would require
│ │ └─ python >=3.9,<=3.11 , which can be installed;
│ ├─ mdanalysistests 2.7.0 would require
│ │ └─ python >=3.9,<=3.12 with the potential options
│ │ ├─ python 3.10.0, which can be installed;
│ │ ├─ python [3.10.1|3.10.10|...|3.10.9], which can be installed;
│ │ ├─ python [3.9.0|3.9.1|...|3.9.9], which can be installed;
│ │ ├─ python 3.11.0, which can be installed;
│ │ ├─ python [3.11.1|3.11.10|...|3.11.9], which can be installed;
│ │ ├─ python 3.12.0, which can be installed;
│ │ └─ python [3.12.0rc3|3.13.0rc1|3.13.0rc2|3.13.0rc3] would require
│ │ └─ _python_rc, which does not exist (perhaps a missing channel);
│ └─ mdanalysistests 2.8.0 would require
│ └─ mdanalysis 2.8.0 with the potential options
│ ├─ mdanalysis 2.8.0 would require
│ │ └─ python >=3.10,<3.11.0a0 , which can be installed;
│ ├─ mdanalysis 2.8.0 would require
│ │ └─ python >=3.11,<3.12.0a0 , which can be installed;
│ └─ mdanalysis 2.8.0 would require
│ └─ python_abi 3.12.* *_cp312, which requires
│ └─ python 3.12.* *_cpython, which can be installed;
└─ python 3.13** is not installable because there are no viable options
├─ python [3.12.0rc3|3.13.0rc1|3.13.0rc2|3.13.0rc3], which cannot be installed (as previously explained);
└─ python 3.13.0 conflicts with any installable versions previously reported.
|
main-tests (ubuntu-latest, 3.11, latest)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (ubuntu-latest, 3.11, latest)
/usr/share/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (ubuntu-latest, 3.10, latest)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (ubuntu-latest, 3.10, latest)
/usr/share/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (ubuntu-latest, 3.12, latest)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (ubuntu-latest, 3.12, latest)
/usr/share/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (windows-latest, 3.13, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.13, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.13, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.13, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.13, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.13, develop)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (windows-latest, 3.13, develop)
C:\Miniconda3\Lib\argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (windows-latest, 3.13, develop)
LibMambaUnsatisfiableError: Encountered problems while solving:
- nothing provides _python_rc needed by python-3.13.0rc1-h27ba58f_0_cp313t
Could not solve for environment specs
The following packages are incompatible
\u251c\u2500 mdanalysis is installable with the potential options
\u2502 \u251c\u2500 mdanalysis [0.19.2|0.20.0|...|2.0.0] would require
\u2502 \u2502 \u2514\u2500 python >=3.6,<3.7.0a0 , which can be installed;
\u2502 \u251c\u2500 mdanalysis [0.19.2|0.20.0|...|2.1.0] would require
\u2502 \u2502 \u2514\u2500 python >=3.7,<3.8.0a0 , which can be installed;
\u2502 \u251c\u2500 mdanalysis [0.20.1|1.0.0|...|2.4.3] would require
\u2502 \u2502 \u2514\u2500 python >=3.8,<3.9.0a0 , which can be installed;
\u2502 \u251c\u2500 mdanalysis [1.0.0|2.0.0|...|2.7.0] would require
\u2502 \u2502 \u2514\u2500 python >=3.9,<3.10.0a0 , which can be installed;
\u2502 \u251c\u2500 mdanalysis [2.1.0|2.2.0|...|2.8.0] would require
\u2502 \u2502 \u2514\u2500 python >=3.10,<3.11.0a0 , which can be installed;
\u2502 \u251c\u2500 mdanalysis [2.4.1|2.4.2|...|2.8.0] would require
\u2502 \u2502 \u2514\u2500 python >=3.11,<3.12.0a0 , which can be installed;
\u2502 \u2514\u2500 mdanalysis [2.7.0|2.8.0] would require
\u2502 \u2514\u2500 python_abi 3.12.* *_cp312, which requires
\u2502 \u2514\u2500 python 3.12.* *_cpython, which can be installed;
\u2514\u2500 python 3.13** is not installable because there are no viable options
\u251c\u2500 python 3.13.0 conflicts with any installable versions previously reported;
\u2514\u2500 python [3.13.0rc1|3.13.0rc2|3.13.0rc3] would require
\u2514\u2500 _python_rc, which does not exist (perhaps a missing channel).
|
main-tests (ubuntu-latest, 3.12, develop)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (ubuntu-latest, 3.12, develop)
/usr/share/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (ubuntu-latest, 3.11, develop)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (ubuntu-latest, 3.11, develop)
/usr/share/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (ubuntu-latest, 3.10, develop)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (ubuntu-latest, 3.10, develop)
/usr/share/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (windows-latest, 3.10, latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.10, latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.10, latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.10, latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.10, latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.10, latest)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (windows-latest, 3.10, latest)
C:\Miniconda3\Lib\argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (windows-latest, 3.12, latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.12, latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.12, latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.12, latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.12, latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.12, latest)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (windows-latest, 3.12, latest)
C:\Miniconda3\Lib\argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (windows-latest, 3.11, latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.11, latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.11, latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.11, latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.11, latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.11, latest)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (windows-latest, 3.11, latest)
C:\Miniconda3\Lib\argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (windows-latest, 3.10, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.10, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.10, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.10, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.10, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.10, develop)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (windows-latest, 3.10, develop)
C:\Miniconda3\Lib\argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (macOS-latest, 3.10, latest)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (macOS-latest, 3.10, latest)
/Users/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (macOS-latest, 3.11, latest)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (macOS-latest, 3.11, latest)
/Users/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (windows-latest, 3.11, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.11, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.11, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.11, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.11, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.11, develop)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (windows-latest, 3.11, develop)
C:\Miniconda3\Lib\argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (windows-latest, 3.12, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.12, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.12, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.12, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.12, develop)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
|
main-tests (windows-latest, 3.12, develop)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (windows-latest, 3.12, develop)
C:\Miniconda3\Lib\argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (macOS-latest, 3.10, develop)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (macOS-latest, 3.10, develop)
/Users/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (macOS-latest, 3.12, develop)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (macOS-latest, 3.12, develop)
/Users/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (macOS-latest, 3.11, develop)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (macOS-latest, 3.11, develop)
/Users/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (macOS-latest, 3.13, develop)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (macOS-latest, 3.13, develop)
/Users/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (macOS-latest, 3.13, develop)
LibMambaUnsatisfiableError: Encountered problems while solving:
- nothing provides mdanalysis 0.15.0 needed by mdanalysistests-0.15.0-py27_0
Could not solve for environment specs
The following packages are incompatible
├─ mdanalysistests is installable with the potential options
│ ├─ mdanalysistests 0.15.0 would require
│ │ └─ mdanalysis 0.15.0 , which does not exist (perhaps a missing channel);
│ ├─ mdanalysistests 0.16.0 would require
│ │ └─ mdanalysis 0.16.0 , which does not exist (perhaps a missing channel);
│ ├─ mdanalysistests 0.16.1 would require
│ │ └─ mdanalysis 0.16.1 , which does not exist (perhaps a missing channel);
│ ├─ mdanalysistests [0.16.2|0.17.0|...|0.20.1] would require
│ │ └─ python [2.7* |>=2.7,<2.8.0a0 ], which can be installed;
│ ├─ mdanalysistests [0.17.0|0.18.0] would require
│ │ └─ python [3.5* |>=3.5,<3.6.0a0 ], which can be installed;
│ ├─ mdanalysistests 0.17.0 would require
│ │ └─ python 3.6* , which can be installed;
│ ├─ mdanalysistests [0.18.0|0.19.0|...|2.0.0] would require
│ │ └─ python >=3.6,<3.7.0a0 , which can be installed;
│ ├─ mdanalysistests [0.19.2|0.20.1|...|2.1.0] would require
│ │ └─ python >=3.7,<3.8.0a0 , which can be installed;
│ ├─ mdanalysistests [0.20.1|1.0.0|...|2.2.0] would require
│ │ └─ python >=3.8,<3.9.0a0 , which can be installed;
│ ├─ mdanalysistests [2.0.0|2.1.0|2.2.0] would require
│ │ └─ python >=3.9,<3.10.0a0 , which can be installed;
│ ├─ mdanalysistests [2.1.0|2.2.0] would require
│ │ └─ python >=3.10,<3.11.0a0 , which can be installed;
│ ├─ mdanalysistests [2.2.0|2.3.0] would require
│ │ └─ python >=3.8,<=3.10 , which can be installed;
│ ├─ mdanalysistests [2.4.1|2.4.2|2.4.3] would require
│ │ └─ python >=3.8,<=3.11 , which can be installed;
│ ├─ mdanalysistests [2.5.0|2.6.1] would require
│ │ └─ python >=3.9,<=3.11 , which can be installed;
│ ├─ mdanalysistests 2.7.0 would require
│ │ └─ python >=3.9,<=3.12 with the potential options
│ │ ├─ python 3.10.0, which can be installed;
│ │ ├─ python [3.10.1|3.10.10|...|3.10.9], which can be installed;
│ │ ├─ python [3.9.0|3.9.1|...|3.9.9], which can be installed;
│ │ ├─ python 3.11.0, which can be installed;
│ │ ├─ python [3.11.1|3.11.10|...|3.11.9], which can be installed;
│ │ ├─ python 3.12.0, which can be installed;
│ │ └─ python [3.12.0rc3|3.13.0rc1|3.13.0rc2|3.13.0rc3] would require
│ │ └─ _python_rc, which does not exist (perhaps a missing channel);
│ └─ mdanalysistests 2.8.0 would require
│ └─ mdanalysis 2.8.0 with the potential options
│ ├─ mdanalysis 2.8.0 would require
│ │ └─ python >=3.10,<3.11.0a0 , which can be installed;
│ ├─ mdanalysis 2.8.0 would require
│ │ └─ python >=3.11,<3.12.0a0 , which can be installed;
│ └─ mdanalysis 2.8.0 would require
│ └─ python_abi 3.12.* *_cp312, which requires
│ └─ python 3.12.* *_cpython, which can be installed;
└─ python 3.13** is not installable because there are no viable options
├─ python [3.12.0rc3|3.13.0rc1|3.13.0rc2|3.13.0rc3], which cannot be installed (as previously explained);
└─ python 3.13.0 conflicts with any installable versions previously reported.
|
main-tests (macOS-latest, 3.12, latest)
Mamba support is still experimental and can result in differently solved environments!
|
main-tests (macOS-latest, 3.12, latest)
/Users/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|