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@OHDSI

Observational Health Data Sciences and Informatics

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  1. CommonDataModel CommonDataModel Public

    Definition and DDLs for the OMOP Common Data Model (CDM)

    HTML 910 457

  2. Vocabulary-v5.0 Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    PLpgSQL 229 75

  3. Atlas Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript 277 139

  4. Cyclops Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    C++ 39 33

  5. CohortMethod CohortMethod Public

    An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

    R 82 60

  6. PatientLevelPrediction PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    HTML 189 90

Repositories

Showing 10 of 318 repositories
  • DeepPatientLevelPrediction Public

    An R package for performing patient level prediction using deep learning in an observational database in the OMOP Common Data Model.

    OHDSI/DeepPatientLevelPrediction’s past year of commit activity
    R 12 4 23 (2 issues need help) 2 Updated Jan 24, 2025
  • PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    OHDSI/PatientLevelPrediction’s past year of commit activity
    HTML 189 90 30 (1 issue needs help) 3 Updated Jan 24, 2025
  • ETL-LambdaBuilder Public

    CDM Builder leveraging AWS Lambda

    OHDSI/ETL-LambdaBuilder’s past year of commit activity
    C# 15 Apache-2.0 15 0 1 Updated Jan 24, 2025
  • Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    OHDSI/Atlas’s past year of commit activity
    JavaScript 277 Apache-2.0 139 213 (1 issue needs help) 20 Updated Jan 24, 2025
  • Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    OHDSI/Vocabulary-v5.0’s past year of commit activity
    PLpgSQL 229 Unlicense 75 222 12 Updated Jan 24, 2025
  • circe-be Public

    CIRCE is a cohort definition and syntax compiler tool for OMOP CDMv5

    OHDSI/circe-be’s past year of commit activity
    Java 9 Apache-2.0 13 7 7 Updated Jan 24, 2025
  • ClinicalCharacteristics Public

    [under development] table shell approach to OMOP characterization

    OHDSI/ClinicalCharacteristics’s past year of commit activity
    R 0 Apache-2.0 1 11 0 Updated Jan 23, 2025
  • Achilles Public

    Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a OMOP CDM database

    OHDSI/Achilles’s past year of commit activity
    R 133 124 48 4 Updated Jan 23, 2025
  • PhenotypeR Public
    OHDSI/PhenotypeR’s past year of commit activity
    R 2 Apache-2.0 0 20 0 Updated Jan 23, 2025
  • OHDSI/CureIdRegistry’s past year of commit activity
    TSQL 14 9 3 3 Updated Jan 23, 2025

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