v2.0.0

• Find clusters using tcfinder v1.0.0 (source), significantly improving computation speed.
• Support Snakemake 8.
• Add transmission fitness estimation.
• Add default workflow profiles for SLURM execution.
• Add results visualization rules.
• Extend workflow documentation.

Full Changelog: v1.0.0...v2.0.0

v1.0.0

v1.0.0