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Releases: bcgsc/HLAminer
Releases · bcgsc/HLAminer
HLAminer v1.4
-Ability to stream the (.sam) output of modern read aligners, directly into HLAminer.
-Initial support for predicting HLA types from long nanopore reads such as those from Oxford Nanopore Technologies.
-Better information/sub-routine/date tracking in hlaminer
HLAminer v1.3.1
-More concise HLA allele summary in HLAminer_HPTASR.csv and HLAminer_HPRA.csv (associated .log is unchanged and lists all predictions)
-Keeps top two [highest-scoring by HLA group] predictions per gene and only the 'P' designated allele when the summary include HLA Sequences reported to have the same antigen binding domain.
-For the original output, refer to the HLAminer_v1-2.pl included in the ./bin directory
-A prediction example from MCF-7 PacBio RNA-seq reads is also provided