Best Approach for Variant Calling with Mutect2 on Drug-Sensitive and Drug-Resistant Cancer Cell Lines #5411
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: carrot-test-run-from-pr-comment | |
| on: | |
| issue_comment: | |
| types: [created] | |
| jobs: | |
| publish-test: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - name: Parse comment | |
| uses: broadinstitute/[email protected] | |
| with: | |
| software-name: gatk | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| topic-name: ${{ secrets.CARROT_TOPIC_NAME }} | |
| sa-key: ${{ secrets.CARROT_SA_KEY }} | |
| minimum-permissions: write |