Run nf-test

Add pre filter and shard counting step #2764

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Run time

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Job	Run time
conda \| 1	44s
conda \| 2	45s
conda \| 3	47s
conda \| 4	1m 26s
conda \| 5	1m 24s
docker_self_hosted \| 1	25s
docker_self_hosted \| 2	25s
docker_self_hosted \| 3	57s
docker_self_hosted \| 4	24s
docker_self_hosted \| 5	26s
singularity \| 1	26s
singularity \| 2	1m 18s
singularity \| 3	26s
singularity \| 4	24s
singularity \| 5	1m 6s
	11m 23s