Nextflow stdout:

ERROR ~ Error executing process > 'NFCORE_SCRNASEQ:SCRNASEQ:SCRNASEQ_ALEVIN:ALEVINQC (Sample_X)'

Caused by:
  Process `NFCORE_SCRNASEQ:SCRNASEQ:SCRNASEQ_ALEVIN:ALEVINQC (Sample_X)` terminated with an error exit status (125)


Command executed:

  #!/usr/bin/env Rscript
  require(alevinQC)
  alevinFryQCReport(
      mapDir = "Sample_X_alevin_results/af_map",
      quantDir = "Sample_X_alevin_results/af_quant",
      permitDir= "Sample_X_alevin_results/af_quant",
      sampleId = "Sample_X",
      outputFile = "alevin_report_Sample_X.html",
      outputFormat = "html_document",
      outputDir = "./",
      forceOverwrite = TRUE
  )
  
  yaml::write_yaml(
      list(
          'NFCORE_SCRNASEQ:SCRNASEQ:SCRNASEQ_ALEVIN:ALEVINQC'=list(
              'alevinqc' = paste(packageVersion('alevinQC'), collapse='.')
          )
      ),
      "versions.yml"
  )

Command exit status:
  125

Command output:
  (empty)

Command error:
  Unable to find image 'quay.io/biocontainers/bioconductor-alevinqc:1.12.1--r41h9f5acd7_0' locally
  docker: Error response from daemon: Head "https://quay.io/v2/biocontainers/bioconductor-alevinqc/manifests/1.12.1--r41h9f5acd7_0": unable to decode token response: EOF.
  See 'docker run --help'.

Work dir:
  /home/runner/work/scrnaseq/scrnaseq/.nf-test/tests/6264e47732939bd9691cd8ea56b9ed1f/work/13/e76c78fee76d2566e3623bbd26a4a9

Tip: you can replicate the issue by changing to the process work dir and entering the command `bash .command.run`

 -- Check '/home/runner/work/scrnaseq/scrnaseq/.nf-test/tests/6264e47732939bd9691cd8ea56b9ed1f/meta/nextflow.log' file for details
ERROR ~ Pipeline failed. Please refer to troubleshooting docs: https://nf-co.re/docs/usage/troubleshooting

 -- Check '/home/runner/work/scrnaseq/scrnaseq/.nf-test/tests/6264e47732939bd9691cd8ea56b9ed1f/meta/nextflow.log' file for details
Nextflow stderr:

Nextflow 24.10.3 is available - Please consider updating your version to it