Added 2FAST2Q module #2328
Triggered via pull request
January 23, 2025 17:15
afombravo
Status
Cancelled
Total duration
6m 28s
Artifacts
–
lint.yml
on: pull_request
nf-core-changes
6s
pre-commit
11s
Matrix: nf-core lint modules
confirm-pass
3s
Annotations
41 errors and 8 warnings
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nf-core lint modules (catpack/prepare)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (fast2q)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (last/dotplot)
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nf-core lint modules (gatk4/baserecalibrator)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (last/lastal)
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nf-core lint modules (last/lastdb)
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nf-core lint modules (last/postmask)
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nf-core lint modules (last/split)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (mmseqs/createdb)
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nf-core lint modules (last/mafswap)
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nf-core lint modules (mmseqs/cluster)
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nf-core lint modules (last/mafconvert)
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nf-core lint modules (last/train)
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nf-core lint modules (mmseqs/databases)
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nf-core lint modules (mmseqs/createtsv)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (mmseqs/easysearch)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (mmseqs/createindex)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (mmseqs/taxonomy)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (mmseqs/tsv2exprofiledb)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (odgi/draw)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (mmseqs/linclust)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (mmseqs/search)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (odgi/build)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (odgi/unchop)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (odgi/squeeze)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (odgi/sort)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (odgi/layout)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (odgi/stats)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (seqkit/replace)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (openms/filefilter)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (trgt/merge)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (odgi/view)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (odgi/viz)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (severus)
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nf-core lint modules (trgt/genotype)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (trgt/plot)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (vcfanno)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (catpack/contigs)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (bbmap/repair)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (catpack/addnames)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core lint modules (catpack/bins)
Canceling since a higher priority waiting request for 'Run Linting-7318' exists
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nf-core-changes
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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pre-commit
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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pre-commit
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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nf-core lint modules (catpack/contigs)
Runner ubuntu-2204-x64_i-05d2ac22aa4380582 did not respond to a cancelation request with 00:05:00.
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nf-core lint modules (bbmap/repair)
Runner ubuntu-2204-x64_i-0acdc99ff0033bb86 did not respond to a cancelation request with 00:05:00.
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nf-core lint modules (catpack/addnames)
Runner ubuntu-2204-x64_i-06d6b553d497f449b did not respond to a cancelation request with 00:05:00.
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nf-core lint modules (catpack/bins)
Runner ubuntu-2204-x64_i-092849bf36d8cc052 did not respond to a cancelation request with 00:05:00.
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confirm-pass
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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